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    <title type="text">PRSD Studio</title>
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    <id>tag:prsysdesign.net,2010:03:10</id>


    <entry>
      <title>classifier output as support function</title>
      <link rel="alternate" type="text/html" href="http://prsysdesign.net/index.php/forums/viewthread/163/" />      
      <id>tag:prsysdesign.net,2010:index.php/forums/viewthread/.163</id>
      <published>2010-03-10T14:12:47Z</published>
      <updated></updated>
      <author><name>twilk</name></author>
      <content type="html">
      <![CDATA[
        <p>Hello,
<br />
I am relatively new to prtools -learning in progress:)
</p>
<p>
I&#8217;m looking for a way to achieve from classifier (mapping) not direct class label but a support function value in case, for instance, neural nets - or probabilities that given object is of class X. Generally I want to achieve soft value from given classifier. Is it easly possible or requires a lot of coding?
<br />
Is it correct assumption that after operation dataset * mapping I should get a new dataset where 
<br />
resulting nlab array should contain soft labels set by mapping?
</p>
<p>
Kind regards,
<br />
Tomasz Wilk
</p>
      ]]>
      </content>
    </entry>

    <entry>
      <title>measures in sdcrossval</title>
      <link rel="alternate" type="text/html" href="http://prsysdesign.net/index.php/forums/viewthread/158/" />      
      <id>tag:prsysdesign.net,2010:index.php/forums/viewthread/.158</id>
      <published>2010-03-05T16:14:51Z</published>
      <updated></updated>
      <author><name>Mathieu</name></author>
      <content type="html">
      <![CDATA[
        <p>Hi, 
</p>
<p>
I would like to know the list of &#8216;measures&#8217; that can be used in sdcrossval. In particular I would like to find a measure equivalent to:
<br />
</p><div class="codeblock"><code>
<span style="color: #0000BB">res</span><span style="color: #007700">=</span><span style="color: #0000BB">sdcrossval</span><span style="color: #007700">(</span><span style="color: #0000BB">sdknn</span><span style="color: #007700">*</span><span style="color: #0000BB">sddecide</span><span style="color: #007700">,&nbsp;</span><span style="color: #0000BB">data</span><span style="color: #007700">,&nbsp;</span><span style="color: #DD0000">'measures'</span><span style="color: #007700">,</span><span style="color: #0000BB">&#123;</span><span style="color: #DD0000">'class-errors'</span><span style="color: #0000BB">&#125;</span><span style="color: #007700">)*</span><span style="color: #0000BB">getpriors</span><span style="color: #007700">(</span><span style="color: #0000BB">data</span><span style="color: #007700">)'</span><span style="color: #0000BB"></span>
</code></div><p>
</p>
<p>
Thanks
</p>
<p>
Mathieu
</p>
      ]]>
      </content>
    </entry>

    <entry>
      <title>how to set parameter using treec() when wanting to applying C4.5 in boosting&#63;</title>
      <link rel="alternate" type="text/html" href="http://prsysdesign.net/index.php/forums/viewthread/162/" />      
      <id>tag:prsysdesign.net,2010:index.php/forums/viewthread/.162</id>
      <published>2010-03-09T05:05:13Z</published>
      <updated></updated>
      <author><name>fanvon</name></author>
      <content type="html">
      <![CDATA[
        <p>Hi, I want to use C4.5 algorithm in adaboost for comparison with the well known published works related to boosing papers  for the fact that C4.5 is usually used in previous works, 
<br />
  How do I set the parameter for function treec in Prtools in order to perform the classic C4.5 algorithm?
</p>
<p>
thanks
</p>
      ]]>
      </content>
    </entry>

    <entry>
      <title>Can&#8217;t change the cross&#45;validation strategy in sdcrossval</title>
      <link rel="alternate" type="text/html" href="http://prsysdesign.net/index.php/forums/viewthread/161/" />      
      <id>tag:prsysdesign.net,2010:index.php/forums/viewthread/.161</id>
      <published>2010-03-08T17:05:23Z</published>
      <updated>2010-03-08T17:18:08Z</updated>
      <author><name>Mathieu</name></author>
      <content type="html">
      <![CDATA[
        <p>Hi,
</p>
<p>
In PRSD Studio 2.0.5, I get the following error when I tried the example in the documentation about the different cross-validation strategies:
<br />
</p><div class="codeblock"><code>
<span style="color: #007700">&gt;&gt;&nbsp;</span><span style="color: #0000BB">load&nbsp;fruit</span><span style="color: #007700">;&nbsp;</span><span style="color: #0000BB">pd</span><span style="color: #007700">=&nbsp;</span><span style="color: #0000BB">sdgauss</span><span style="color: #007700">*</span><span style="color: #0000BB">sddecide</span><span style="color: #007700">;&nbsp;</span><span style="color: #0000BB">&#91;r2</span><span style="color: #007700">,</span><span style="color: #0000BB">e2&#93;</span><span style="color: #007700">=</span><span style="color: #0000BB">sdcrossval</span><span style="color: #007700">(</span><span style="color: #0000BB">pd</span><span style="color: #007700">,</span><span style="color: #0000BB">a</span><span style="color: #007700">,</span><span style="color: #DD0000">'folds'</span><span style="color: #007700">,</span><span style="color: #0000BB">2</span><span style="color: #007700">,</span><span style="color: #DD0000">'method'</span><span style="color: #007700">,</span><span style="color: #DD0000">'random'</span><span style="color: #007700">);<br />???&nbsp;</span><span style="color: #0000BB">Undefined&nbsp;</span><span style="color: #007700">function&nbsp;or&nbsp;</span><span style="color: #0000BB">method&nbsp;</span><span style="color: #DD0000">'getstate'&nbsp;</span><span style="color: #007700">for&nbsp;</span><span style="color: #0000BB">input&nbsp;arguments&nbsp;of&nbsp;type&nbsp;</span><span style="color: #DD0000">'sdppl'</span><span style="color: #007700">.<br /><br /></span><span style="color: #0000BB">Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\private\sde_randomization</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">sde_randomization&nbsp;at&nbsp;19<br /><br /><br />Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\sdcrossval</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">sdcrossval&nbsp;at&nbsp;120</span>
</code></div><p>
</p>
<p>
Thank you for your help.
</p>
<p>
Mathieu
</p>
      ]]>
      </content>
    </entry>

    <entry>
      <title>Use custom feature selection algorithm in a pipeline</title>
      <link rel="alternate" type="text/html" href="http://prsysdesign.net/index.php/forums/viewthread/157/" />      
      <id>tag:prsysdesign.net,2010:index.php/forums/viewthread/.157</id>
      <published>2010-03-05T16:08:31Z</published>
      <updated>2010-03-05T17:32:50Z</updated>
      <author><name>Mathieu</name></author>
      <content type="html">
      <![CDATA[
        <p>Hi,
</p>
<p>
I created a custom feature selection algorithm with sdalg. Is it possible to use it in a pipeline so that I can do the following thing:
<br />
</p><div class="codeblock"><code>
<span style="color: #0000BB">p&nbsp;</span><span style="color: #007700">=&nbsp;</span><span style="color: #0000BB">sdcrossval</span><span style="color: #007700">((</span><span style="color: #0000BB">myalgo</span><span style="color: #007700">*</span><span style="color: #0000BB">sdlinear</span><span style="color: #007700">)*</span><span style="color: #0000BB">sddecide</span><span style="color: #007700">,</span><span style="color: #0000BB">data</span><span style="color: #007700">)</span>
</code></div><p>
</p>
<p>
I tried to use <i>sdp_fsel</i> but I got the following error when trying it:
<br />
</p><div class="codeblock"><code>
<span style="color: #007700">&gt;&gt;&nbsp;</span><span style="color: #0000BB">p</span><span style="color: #007700">=</span><span style="color: #0000BB">sdp_fsel</span><span style="color: #007700">(</span><span style="color: #0000BB">14</span><span style="color: #007700">,&nbsp;</span><span style="color: #0000BB">&#91;1&nbsp;2&nbsp;4&nbsp;6&#93;</span><span style="color: #007700">)<br />???&nbsp;</span><span style="color: #0000BB">Input&nbsp;argument&nbsp;</span><span style="color: #DD0000">"lab"&nbsp;</span><span style="color: #0000BB">is&nbsp;undefined</span><span style="color: #007700">.<br /><br /></span><span style="color: #0000BB">Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\sdp_fsel</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">sdp_fsel&nbsp;at&nbsp;24</span>
</code></div><p>
</p>
<p>
Thanks
</p>
<p>
Mathieu
</p>
      ]]>
      </content>
    </entry>

    <entry>
      <title>sdtree error</title>
      <link rel="alternate" type="text/html" href="http://prsysdesign.net/index.php/forums/viewthread/156/" />      
      <id>tag:prsysdesign.net,2010:index.php/forums/viewthread/.156</id>
      <published>2010-03-05T15:41:53Z</published>
      <updated>2010-03-05T15:53:26Z</updated>
      <author><name>Mathieu</name></author>
      <content type="html">
      <![CDATA[
        <p>Hi, 
</p>
<p>
I use PRSD Studio 2.0.5 and I have the following error when I use the sdtree classifier on the adult dataset from UCI repository (in attachment): (Note: the problem seems to happen every time my dataset has more than 19 rows)
</p>
<p>
</p><div class="codeblock"><code>
<span style="color: #007700">&gt;&gt;&nbsp;</span><span style="color: #0000BB">sdtree</span><span style="color: #007700">(</span><span style="color: #0000BB">data</span><span style="color: #007700">)<br />.???&nbsp;</span><span style="color: #0000BB">Undefined&nbsp;</span><span style="color: #007700">function&nbsp;or&nbsp;</span><span style="color: #0000BB">method&nbsp;</span><span style="color: #DD0000">'getcodes'&nbsp;</span><span style="color: #007700">for&nbsp;</span><span style="color: #0000BB">input&nbsp;arguments&nbsp;of&nbsp;type&nbsp;</span><span style="color: #DD0000">'double'</span><span style="color: #007700">.<br /><br /></span><span style="color: #0000BB">Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\</span><span style="color: #007700">@</span><span style="color: #0000BB">sdlab\subset</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">subset&nbsp;at&nbsp;23<br /><br /><br />Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\</span><span style="color: #007700">@</span><span style="color: #0000BB">sddata\private\subset_ind</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">subset_ind&nbsp;at&nbsp;17<br /><br /><br />Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\</span><span style="color: #007700">@</span><span style="color: #0000BB">sddata\subsref</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">subsref&nbsp;at&nbsp;35<br /><br /><br />Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\sdtree</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">tree_getcrit&nbsp;at&nbsp;288<br /><br /><br />Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\sdtree</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">tree_featthr&nbsp;at&nbsp;281<br /><br /><br />Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\sdtree</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">tree_processallfeat&nbsp;at&nbsp;250<br /><br /><br />Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\sdtree</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">tree_train&nbsp;at&nbsp;140<br /><br /><br />Error&nbsp;in&nbsp;</span><span style="color: #007700">==&gt;&nbsp;</span><span style="color: #0000BB">C</span><span style="color: #007700">:</span><span style="color: #0000BB">\Program&nbsp;Files\MATLAB\R2009b\toolbox\prsd_toolbox\sdtree</span><span style="color: #007700">.</span><span style="color: #0000BB">p</span><span style="color: #007700">&gt;</span><span style="color: #0000BB">sdtree&nbsp;at&nbsp;49</span>
</code></div><p>
</p>
      ]]>
      </content>
    </entry>

    <entry>
      <title>bpxnc &#45; how this works</title>
      <link rel="alternate" type="text/html" href="http://prsysdesign.net/index.php/forums/viewthread/154/" />      
      <id>tag:prsysdesign.net,2010:index.php/forums/viewthread/.154</id>
      <published>2010-02-28T21:32:27Z</published>
      <updated></updated>
      <author><name>zmychu</name></author>
      <content type="html">
      <![CDATA[
        <p>Hallo,
<br />
I am trying to understand the way the bpxnc works. I read documentation and right now I am trying to get closer the the PRTools code. 
<br />
Could You please send me the picture (jpg) how networks structure looks like  when I type bpxnc([],[10 10], nr_of_epoche)? I need just the draft picture in which I could find the information where are weights and how the input and output of such network looks like for the &#8216;soft&#8217; version.&nbsp; 
</p>
<p>
[10 10] means number of units in each hidden layer 
</p>
<p>
Please help me with this problem
</p>
      ]]>
      </content>
    </entry>

    <entry>
      <title>votec</title>
      <link rel="alternate" type="text/html" href="http://prsysdesign.net/index.php/forums/viewthread/160/" />      
      <id>tag:prsysdesign.net,2010:index.php/forums/viewthread/.160</id>
      <published>2010-03-06T16:40:42Z</published>
      <updated></updated>
      <author><name>lilia38</name></author>
      <content type="html">
      <![CDATA[
        <p>hello prtools team
<br />
I am trying to combine diffrent base classifiers using majority voting &#8216;votec&#8217;. The classifiers are: ldc,knnc, svc and treec. It work with  all the combinig rule prodc, minc, medianc, maxc, meanc but with votec i have this error message:
</p>
<p>
index exceeds matrix dimensions.
</p>
<p>
Error in ==&gt; C:\MATLAB6p5\work\prtools\@dataset\subsref.m
<br />
On line 78  ==&gt; 
</p>
<p>
Error in ==&gt; C:\MATLAB6p5\work\prtools\fixedcc.m
<br />
On line 143  ==&gt; labels = labeld(a(:,J));
</p>
<p>
Error in ==&gt; C:\MATLAB6p5\work\prtools\fixedcc.m
<br />
On line 177  ==&gt; v = feval&#40;mfilename,a*w.data&#123;1&#125;,[],type,name&#41;;
</p>
<p>
Error in ==&gt; C:\MATLAB6p5\work\prtools\map.m
<br />
On line 179  ==&gt; d = feval&#40;mapp,a,b&#41;;
</p>
<p>
Error in ==&gt; C:\MATLAB6p5\work\prtools\@mapping\mtimes.m
<br />
On line 15  ==&gt; 
</p>
<p>
Error in ==&gt; C:\MATLAB6p5\work\prtools\testc.m
<br />
On line 289  ==&gt; [out1,out2]= feval&#40;mfilename,a*w,type,label&#41;;[/size]
</p>
<p>
thanks in advance
</p>
      ]]>
      </content>
    </entry>

    <entry>
      <title>Turn off messages in sdcrossval</title>
      <link rel="alternate" type="text/html" href="http://prsysdesign.net/index.php/forums/viewthread/159/" />      
      <id>tag:prsysdesign.net,2010:index.php/forums/viewthread/.159</id>
      <published>2010-03-05T17:23:00Z</published>
      <updated>2010-03-05T19:47:37Z</updated>
      <author><name>Mathieu</name></author>
      <content type="html">
      <![CDATA[
        <p>Hi, 
</p>
<p>
Is there a way to turn off messages like: <i>10 folds: [1: ] [2: ] ...</i> in sdcrossval?
</p>
<p>
Thanks
</p>
<p>
Mathieu
</p>
      ]]>
      </content>
    </entry>

    <entry>
      <title>sda_featex is missing</title>
      <link rel="alternate" type="text/html" href="http://prsysdesign.net/index.php/forums/viewthread/155/" />      
      <id>tag:prsysdesign.net,2010:index.php/forums/viewthread/.155</id>
      <published>2010-03-05T15:38:08Z</published>
      <updated></updated>
      <author><name>Mathieu</name></author>
      <content type="html">
      <![CDATA[
        <p>Hi,
</p>
<p>
It seems that the sda_featex function, mentioned in the knowledge base, is missing in PRSD Studio 2.0.5. 
</p>
<p>
Mathieu
</p>
      ]]>
      </content>
    </entry>


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